# | Acc. | Type | Year | Sample Cnt. | Sample Grouping |
---|---|---|---|---|---|
1 | RGED7869 | Microarray | 2009 | 21 |
A Renal cyst from PKD1 patient, pooled from 4 different small cysts B Renal cyst from PKD1 patient, medium single cyst C Renal cyst from PKD1 patient, large single cyst D Minimally cystic tissue from PKD1 patient E Non-cancerous renal cortical tissue from nephrectomized kidney with isolated renal cell carcinoma of patient |
# | Acc. | Type | Year | Sample Cnt. | Sample Grouping |
---|---|---|---|---|---|
1 | RGED41030 | Microarray | 2013 | 6 |
A fibroblast_control B fibroblast_uremic |
2 | RGED43484 | Microarray | 2013 | 6 |
A Healthy Monocyte B Uremic Monocyte |
3 | RGED53336 | Microarray | 2013 | 9 |
A PBMCs vs. PBMCs treated with TNF-a from 10 pooled healthy donors B PBMCs vs. PBMCs treated with EPO-a from 10 pooled healthy donors C PBMCs vs. PBMCs treated with TNF-a and EPO-a from 10 pooled healthy donors |
4 | RGED37171 | Microarray | 2012 | 115 |
A healthy volunteer whole blood (WB) B pre-transplant uremic whole blood (WB) |
5 | RGED11227 | Microarray | 2008 | 16 |
A Blood sample from patient before NHD treatment B Blood sample from patient after NHD treatment |
# | Acc. | Type | Year | Sample Cnt. | Sample Grouping |
---|---|---|---|---|---|
1 | RGED46897 | Microarray | 2013 | 6 |
A treated with: serum from patients without diabetes (C) for 24hr B treated with: serum from patients with diabetes and without kidney disease (DKD-) for 24hr C treated with: serum from patients with diabetes and kidney disease (DKD+) for 24hr |
2 | RGED46899 | Microarray | 2013 | 6 |
A treated with: serum from patients without diabetes (C) for 24hr B treated with: serum from patients with diabetes and without kidney disease (DKD-) for 24hr C treated with: serum from patients with diabetes and kidney disease (DKD+) for 24hr |
3 | RGED30566 | Microarray | 2011 | 25 |
A Tubuli of control kidney B Glomerulus of control kidney |
4 | RGED30528 | Microarray | 2011 | 22 |
A Glomerulus of control kidney B Glomerulus of Diabetic Human Kidney |
5 | RGED30529 | Microarray | 2011 | 22 |
A Tubuli of control kidney B Tubuli of Diabetic Human Kidney |
6 | RGED23338 | Microarray | 2011 | 9 |
A HK-2 cells, 0hrs B HK-2 cells, 24hrs C HK-2 cells, 48hrs |
7 | RGED20247 | Microarray | 2010 | 18 |
A Control_18hrs B Control_48hrs C C-peptide_18hrs D TGF-beta_48hrs E C-peptide_48hrs F TGF-beta_C-peptide_48hrs |
8 | RGED1009 | Microarray | 2004 | 6 |
A Control B Diabetes |
# | Acc. | Type | Year | Sample Cnt. | Sample Grouping |
---|---|---|---|---|---|
1 | RGED35487 | Microarray | 2012 | 31 |
A Kidney biopsy from human IgAN B Kidney biopsy from human pre-transplant living donor |
2 | RGED35488 | Microarray | 2012 | 31 |
A Tubulointerstitium from IgAN patient B Tubulointerstitium from control living donor |
3 | RGED27676 | Microarray | 2012 | 6 |
A IgAN Patient with a Nomal Renal Function and microscopic hematuria B IgAN Patient with a Nomal Renal Function and macroscopic hematuria |
# | Acc. | Type | Year | Sample Cnt. | Sample Grouping |
---|---|---|---|---|---|
1 | RGED53757 | Microarray | 2014 | 144 |
A normal match to Stage 1 ccRCC B Stage 1 ccRCC C normal match to Stage 2 ccRCC D Stage 2 ccRCC E normal match to Stage 3 ccRCC F Stage 3 ccRCC G normal match to Stage 4 ccRCC H Stage 4 ccRCC |
2 | RGED46699 | Microarray | 2014 | 130 |
A tissue: normal B tissue: tumor |
3 | RGED36957 | Microarray | 2013 | 31 |
A disease status: renal cell carcinoma/cesd16 status: 0 B disease status: renal cell carcinoma/cesd16 status: 1 |
4 | RGED40435 | Microarray | 2013 | 202 |
A ccRCC tumour tissue B adjacent non-tumour renal tissue |
5 | RGED47352 | Microarray | 2013 | 9 |
A non-metastatic ccRCC B primary metastatic ccRCC |
6 | RGED51627 | Microarray | 2013 | 6 |
A Untreated control, A-498 B 1000µM zebularine, A-498, biological rep 3 |
7 | RGED24455 | RNA-seq | 2013 | 20 |
A kidney normal tissue B kidney cancer tissue |
8 | RGED32297 | Microarray | 2012 | 6 |
A cell line: 786-M1A cell line (metastatic) protocol: control B cell line: 786-M1A cell line (metastatic) protocol: HA-VHL reintroduced |
9 | RGED32298 | Microarray | 2012 | 6 |
A cell ine: 786-O renal cell carcinoma cell line agent: control B cell ine: 786-O renal cell carcinoma cell line agent: 5-aza-deoxycytidine |
10 | RGED35417 | Microarray | 2012 | 7 |
A cell line: 786-O renal cell carcinoma cell line /tranduced with: pGIPZ control vector B cell line: 786-O renal cell carcinoma cell line /tranduced with: SUZ12sh1 |
11 | RGED37616 | RNA-seq | 2012 | 33 |
A tissue: non-tumoral renal cortex B tissue: clear cell renal cell carcinoma |
12 | RGED29609 | Microarray | 2011 | 39 |
A Clear-cell renal cell carcinoma |
13 | RGED33371 | Microarray | 2011 | 65 |
A Normal Adrenal Cortex B Adrenocortical Adenoma C Adrenocortical Carcinoma |
14 | RGED26574 | Microarray | 2011 | 67 |
A disease state: normal_tissue B disease state: ccRCC C disease state: Chromophobe D disease state: HLRCC E disease state: Pap_type1 F disease state: Pap_type2 |
15 | RGED20896 | Microarray | 2010 | 6 |
A tissue: normal B tissue: tumor |
16 | RGED21816 | Microarray | 2010 | 18 |
A disease state: control (normal kidney) B disease state: BHD renal tumor |
17 | RGED23627 | Microarray | 2010 | 5 |
A RCC parental cell line (non-metastatic) B RCC Lung metastatic |
18 | RGED19982 | Microarray | 2010 | 30 |
A Chromophobe RCC tumor tissue B Oncocytoma tissue |
19 | RGED23629 | Microarray | 2010 | 32 |
A Primary RCC tumor B Metastatic RCC tumor |
20 | RGED20491 | Microarray | 2010 | 67 |
A treatment: None B treatment: emetine C treatment: Caffeine |
21 | RGED22541 | Microarray | 2010 | 48 |
A primary clear-cell renal cell carcinoma B pulmonary metastasis of clear-cell renal cell carcinoma (laser resection) |
22 | RGED22563 | Microarray | 2010 | 22 |
A RCC Cell line control B RCC Cell line 5-Aza-2-deoxycytidine treated |
23 | RGED10320 | Microarray | 2009 | 144 |
A Pretreatment tumor tissue: Non-relapse B Pretreatment tumor tissue: Relapse |
24 | RGED10927 | Microarray | 2009 | 65 |
A Normal Adrenal Cortex B Adrenocortical Adenoma C Adrenocortical Carcinoma |
25 | RGED12114 | Microarray | 2009 | 27 |
A mRNA from Renal Clear Cell Carcinoma |
26 | RGED14762 | Microarray | 2009 | 22 |
A disease state: Normal B disease state: clear cell renal cell carcinoma |
27 | RGED14378 | Microarray | 2009 | 20 |
A pulmonary metastasis of clear-cell renal cell carcinoma (laser resection) Gender: Female B pulmonary metastasis of clear-cell renal cell carcinoma (laser resection) Gender: Male |
28 | RGED15641 | Microarray | 2009 | 92 |
A normal human kidney tissue B cancerous human kidney tissue, clear cell RCC C cancerous human kidney tissue, papillary RCC D cancerous human kidney tissue, transitional cell carcinoma E cancerous human kidney tissue, chromophobe RCC F cancerous human kidney tissue, oncocytoma |
29 | RGED11024 | Microarray | 2008 | 79 |
A Normal kidney B Renal Tumor |
30 | RGED11151 | Microarray | 2008 | 67 |
A normal kidney B renal tumor |
31 | RGED11904 | Microarray | 2008 | 21 |
A VHL: WT HIF: Negative B VHL: Deficiant HIF: HIF-2 C VHL: Deficiant HIF: HIF-1 + HIF- 2 |
32 | RGED11985 | Microarray | 2008 | 12 |
A mRNA from Renal Clear Cell Carcinoma |
33 | RGED12090 | Microarray | 2008 | 18 |
A Chromophobe B Oncocytoma |
34 | RGED12606 | Microarray | 2008 | 10 |
A normal kidney tissue B clear cell renal cell carcinoma C metastasis clear cell renal cell carcinoma |
35 | RGED8289 | Microarray | 2008 | 8 |
A HEK293 cell line with noninduced HNF4a2 B HEK293 cell line with induced HNF4a2 |
36 | RGED7023 | Microarray | 2007 | 47 |
A subtype: NO B subtype: P1 C subtype: P1.2A D subtype: P2A E subtype: P2B |
37 | RGED2712 | Microarray | 2005 | 35 |
A fetal kidney samples B Clear cell sarcoma of the kidney C Wilms tumors |
38 | RGED2700 | Microarray | 2005 | 8 |
A HEK293 cell line with noninduced HNF4a2 B HEK293 cell line with induced HNF4a2 |
39 | RGED2748 | Microarray | 2005 | 34 |
A Papillary RCC Sample Histo: 1 B Papillary RCC Sample Histo: 2A C Papillary RCC Sample Histo: 2B |
# | Acc. | Type | Year | Sample Cnt. | Sample Grouping |
---|---|---|---|---|---|
1 | RGED46474 | Microarray | 2014 | 40 |
A Acute Rejection B Non-Rejection |
2 | RGED34437 | Microarray | 2014 | 66 |
A disease status: acute renal allograft rejection, ARIA B disease status: borderline acute renal allograft rejection C disease status: no significant abnormalities D disease status: baseline, living donor |
3 | RGED43974 | Microarray | 2014 | 554 |
A Kidney_donor_BD B Kidney_donor_DCD C Kidney_donor_Living |
4 | RGED15296 | Microarray | 2014 | 75 |
A Acute Kidney Rejection B Well-functioning kidney transplant |
5 | RGED48581 | Microarray | 2013 | 306 |
A tissue: renal allograft biopsy diagnosis: ABMR B tissue: renal allograft biopsy diagnosis: mixed C tissue: nephrectomy D tissue: renal allograft biopsy diagnosis: non-rejecting E tissue: renal allograft biopsy diagnosis: TCMR |
6 | RGED36059 | Microarray | 2013 | 411 |
A renal allograft biopsy /diagnosis: ABMR B renal allograft biopsy /diagnosis: MIXED C nephrectomy /diagnosis: Nephrectomy D renal allograft biopsy /diagnosis: non-rejecting E renal allograft biopsy /diagnosis: TCMR |
7 | RGED37838 | Microarray | 2013 | 78 |
A tissue: nephrectomy /diagnosis (good,bad): nephrectomy B tissue: renal allograft biopsy /diagnosis (good,bad): good C tissue: renal allograft biopsy /diagnosis (good,bad): bad |
8 | RGED47097 | Microarray | 2013 | 40 |
A Control B Acute renal allograft rejection - Steroid responsive C Acute renal allograft rejection - Steroid resistant |
9 | RGED50058 | Microarray | 2013 | 101 |
A renal allograft biopsy_stable patient B renal allograft biopsy_patient with acute rejection |
10 | RGED52694 | Microarray | 2013 | 28 |
A stable renal graft function_≤2 months B deteriorated renal graft function_≤2 months C stable renal graft function time after transplantation: 3 months D deteriorated renal graft functiontime after transplantation: 3 months |
11 | RGED14346 | Microarray | 2012 | 75 |
A Peripheral Blood from kidney transplant recipients Disease State: Acute Rejection B Peripheral Blood from kidney transplant recipients Disease State: Stable |
12 | RGED41485 | Microarray | 2012 | 8 |
A ccRCC cells treated with DMSO for 24H B ccRCC cells treated with A939572 for 24H |
13 | RGED25902 | Microarray | 2011 | 120 |
A Baseline (0 months) - Non-progressive CADI score B Baseline (0 months) - Progressive CADI score C 6 months - Non-progressive CADI score D 6 months - Progressive CADI score E Discovery set low CADI score F Discovery set high CADI score G Post-transplant rejection H 24 months low CADI score I 24 months high CADI score |
14 | RGED12682 | Microarray | 2010 | 52 |
A Healthy glomeruli B Healthy tubulointerstitium C Diseased tubulointerstitium |
15 | RGED14328 | Microarray | 2010 | 36 |
A kidney allograft biopsy, stable B kidney allograft biopsy, acute rejection |
16 | RGED22229 | Microarray | 2010 | 58 |
A phenotype: Healthy Control B phenotype: Tolerant C phenotype: Standard Immunotherapy |
17 | RGED22459 | Microarray | 2010 | 65 |
A histology: 1yr protocol bx - Banff: i/cg/ci=0 B histology: 1yr protocol bx - Banff: i/cg=0; ci>0 C histology: 1yr protocol bx - Banff: cg=0; i/ci>0 |
18 | RGED14630 | Microarray | 2010 | 10 |
A Stable renal transplant recipients, T0 (time of enrollment) B Stable renal transplant recipients, T1 (3 months after the switching of the therapy) |
19 | RGED20300 | Microarray | 2010 | 24 |
A transplant state: Acute Rejection B transplant state: Stable |
20 | RGED21785 | Microarray | 2010 | 12 |
A Transplant Living Donor, microdissected Tubulus from kidney biopsy B Transplant Living Donor, microdissected Glomerulus from kidney biopsy |
21 | RGED19130 | Microarray | 2009 | 119 |
A state: acute rejection B state: acute tubular necrosis C state: borderline change D state: non-rejection E state: presumed rejection F state: renal recipients with stable function |
22 | RGED12187 | Microarray | 2009 | 77 |
A PBMC|Drug Regime: CNI [Calcineurin Inhibitor (Cyclosporine)] B Whole Blood|Drug Regime: FK506 [Tacrolimus] C PBMC|Drug Regime: Rapa [Drug Regime: Rapamycin] |
23 | RGED10419 | Microarray | 2008 | 29 |
A kidney sample from DCD donor (1 hr after reperfusion) B kidney sample from LD donor (1 hr after reperfusion) |
24 | RGED11166 | Microarray | 2008 | 95 |
A kidney allograft biopsy, baseline, living donor B kidney allograft biopsy, baseline, deceased donor C kidney allograft biopsy, 3 months, living donor D kidney allograft biopsy, 3 months, deceased donor E kidney allograft biopsy, 6 months, living donor F kidney allograft biopsy, 6 months, deceased donor G kidney allograft biopsy, 12 months, living donor H kidney allograft biopsy, 12 months, deceased donor I kidney allograft biopsy, 24 months, living donor J kidney allograft biopsy, 24 months, deceased donor |
25 | RGED7392 | Microarray | 2007 | 30 |
A Normal B Subclinical interstitial fibrosis |
26 | RGED3297 | Microarray | 2005 | 12 |
A Control B Laparoscopic Donor |
27 | RGED1563 | Microarray | 2004 | 62 |
A control healthy blood donor B control healthy donor kidney C Clinical status: PBL sample from transplant patient with renal dysfunction without rejection D Clinical status: PBL sample from patient with well-functioning transplant with no clinical evidence of rejection E Clinical status: PBL sample from transplant patient with kidney undergoing acute rejection F Clinical status: sample from well-functioning transplant with no clinical evidence of rejection G Clinical status: sample from transplant patient with kidney undergoing acute rejection H Clinical status: sample from transplant with renal dysfunction without rejection |
28 | RGED1743 | Microarray | 2004 | 41 |
A BIOPSY FROM A HUMAN KIDNEY WITH A CYCLOSPORINE IMMUNOSUPPRESSIVE REGIMEN B BIOPSY FROM A HUMAN KIDNEY WITH A SIROLIMUS (RAPAMYCIN) IMMUNOSUPPRESSIVE REGIMEN |
# | Acc. | Type | Year | Sample Cnt. | Sample Grouping |
---|---|---|---|---|---|
1 | RGED32591 | Microarray | 2012 | 93 |
A Tubulointerstitium from control living donor B Tubulointerstitium from LN patient C Glomeruli from control living donor D Glomeruli from LN patient |
# | Acc. | Type | Year | Sample Cnt. | Sample Grouping |
---|---|---|---|---|---|
1 | RGED20602 | Microarray | 2010 | 18 |
A kidney biopsy from patient with NSC B kidney biopsy from patient after Tumor Nephrectomy |